This function calculates the counts of intersections for an UpSet plot.
Usage
get_counts_for_upset(subset, min_elements_in_intersection = 100)
Arguments
- subset
A data frame containing the data to be used for the UpSet plot.
- min_elements_in_intersection
An integer specifying the minimum number
of elements in an intersection to be included. Default is 100.
Value
A data frame with the counts of intersections and the concatenated
primary IDs for each intersection.
Details
The function groups the data by all columns except primaryid, calculates
the count of primary IDs for each group, and concatenates the primary IDs into
a single string. The resulting data frame is sorted in descending order of the
counts.
Examples
if (FALSE) { # \dontrun{
# Example usage
get_counts_for_upset(subset, min_elements_in_intersection = 100)
} # }
